PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS59561.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 104aa    MW: 11179.4 Da    PI: 8.9781
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS59561.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.82.6e-1072100230
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
         HLH   2 rrahnerErrRRdriNsafeeLrellPka 30 
                 r++h  +Er+RR+++N+ ++ Lr+l+P++
  EPS59561.1  72 RVSHITVERNRRKQMNDHLSVLRSLMPSL 100
                 899************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.07770104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.76E-871102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-872101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.21E-772104No hitNo description
PfamPF000101.3E-772100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    Send to blast
SDDIFSILEA LESVVSYAPP AVEGSGGGGG GGFGFQTSTR SSSSLETETE QKESSMSKRQ  60
KVGAGDSYAP PRVSHITVER NRRKQMNDHL SVLRSLMPSL YVKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012090117.14e-23PREDICTED: transcription factor SPEECHLESS
TrEMBLS8C5491e-70S8C549_9LAMI; Uncharacterized protein (Fragment)
STRINGGLYMA04G41710.12e-21(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.11e-13bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]